seqme.utils.knn_alignment_score# seqme.utils.knn_alignment_score(xs, labels, n_neighbors=5)[source]# Compute the k-NN feature alignment score of an embedding model. Parameters: xs (ndarray) – Sequence embeddings. labels (ndarray) – Group label for each sequence. n_neighbors (int) – Number of neighbors used by k-NN. Return type: float Returns: Feature alignment score between [0, 1].
